What is the problem?
New firmware version 1.0.6 for the S1 allows host commands (it appears) but the filament sensor does not stop the print. Do you have to enable something in Octoprint to allow this?
Can you share a serial.log (enable first) of this rounout sequence?
Actually it appears the new firmware does NOT enable host commands. The message in Octoprint was gone but after another restart the message is back. Sorry
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You should be able to check that with M115
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